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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853218.1_cds_XP_016512171.1_24839
CDS Infomation

[gene=LOC107829216] [db_xref=GeneID:107829216] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016512171.1] [location=complement(join(36037..37021,37911..38071,38187..38318,38424..38600))] [gbkey=CDS]
Sequence

ATGGTGTTCATTTCAGGCAACGTCCAAAAGCAGCAGCTTCTTTCAAAAATAGCAACAAAT
GATGGACATGGAGAAAACTCAGCTTATTTTGATGGTTGGAAGGCTTATGAAAATGACCCT
TTTCATCTCTCTAACAATCCAAATGGAGTTATTCAGATGGGTCTTGCAGAAAATCAGCTT
TGCTTTGATTTAATCCAAGAATGGGTGGTGAATAACCCAAAAGCCTCCATTTGCACAACT
GAAGGAGCTGAAGATTTCAAAGATATTGCCATTTTTCAAGACTATCATGGCTTGCCAGAA
TTTAGACAGGCAGTTGCAAGGTTTATGGAAAAAGTGAGAGGAGACAGAGTCACGTTTGAC
CCAAATCGCATAGTTATGAGTGGAGGAGCAACTGGAGCTCATGAAACACTGGCTTTTTGT
TTGGCCAATCCTGGAGATGCATTTTTGGTTCCTACCCCATATTATCCTGGATTTGACAGA
GATTTAAGGTGGAGAACTGGTGTACAACTTTTTCCAGTTGTTTGTGACAGTTCTAATGAT
TTCAAGGTCACTAAAAAAGCCTTAGAAGCTGCATATGAAAAAGCTCAAGAATCCAATATT
AATATAAAGGGTTTGCTTATAAACAATCCTTCAAATCCACTAGGCACTCTTCTTGACAGT
GACACACTGAGAGACATAGTAACATTCATAAATTCGAAAAACATCCACTTAATATGCGAC
GAAATTTATGCTGCTACGGTCTTTGATCAGCCCAAATTTTTCAGTGTTTCTGAAATAGTT
GAAGAACATGTTGGATGCAACAAAGATTTGATCCACATTGTTTATAGCTTGTCGAAAGAT
TTGGGATTTCCTGGATTCAGAGTCGGAATTGTTTACTCATACAACGATACTGTAGTCAAC
ATTGCAAGAAAAATGTCAAGCTTCGGGCTCGTTTCAACACAGACACAACATTTGATTGCA
TCAATGTTGTCTGATGAAATTTTCATTGAAAAATTCATTGCTGAGAGTTCTGAAAGACTA
GGGAAAAGACACGGGATGTTCACTAAAGGACTAGCACAAGTTGGAATTAGTACATTGAAG
AGCAATGCTGGTTTATTCTTTTGGATGGATTTAAGAAGACTACTAAAAGAGCCAACATTA
GAATCTGAATTGGAATTGTGGAGAATTATTATAAATGAAGTGAAGCTTAATGTTTCACCA
GGTTGTTCTTTTCATTGTTCTGAACCAGGTTGGTTTAGAGTTTGTTTTGCAAATATGGAC
GATGAAACAATGAGAACTGCTTTAAGAAGGATAAGGAACTTTGTGCTTCAAACAAAGGGA
CTTAATAATAAAGCTGCTGTTAAGAAACAATGCAGTAGGAGCAAACTTCAAATCAGCTTA
TCGTTTCGAAGAATGGATGATTTCATGAATTCACCAGTTCACTCTCCAATGAATTCACCT
TTGGTCAGGACTTGA

Peptide Sequence

PEP ID

XP_016512171.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MVFISGNVQKQQLLSKIATNDGHGENSAYFDGWKAYENDPFHLSNNPNGVIQMGLAENQL
CFDLIQEWVVNNPKASICTTEGAEDFKDIAIFQDYHGLPEFRQAVARFMEKVRGDRVTFD
PNRIVMSGGATGAHETLAFCLANPGDAFLVPTPYYPGFDRDLRWRTGVQLFPVVCDSSND
FKVTKKALEAAYEKAQESNINIKGLLINNPSNPLGTLLDSDTLRDIVTFINSKNIHLICD
EIYAATVFDQPKFFSVSEIVEEHVGCNKDLIHIVYSLSKDLGFPGFRVGIVYSYNDTVVN
IARKMSSFGLVSTQTQHLIASMLSDEIFIEKFIAESSERLGKRHGMFTKGLAQVGISTLK
SNAGLFFWMDLRRLLKEPTLESELELWRIIINEVKLNVSPGCSFHCSEPGWFRVCFANMD
DETMRTALRRIRNFVLQTKGLNNKAAVKKQCSRSKLQISLSFRRMDDFMNSPVHSPMNSP
LVRT

Transcript Sequence

Gene sequence data has not been registered.